NEWS.md
opentimsr
parallel processing to not interfere
with BiocParallel
(issue #16).msLevel
to extract MS level of each spectrum in
MsBackendTimsTof
objects.spectraData
when parameter
columns
of length 1 is provided (issue [#7] (https://github.com/rformassspectrometry/MsBackendTimsTof/issues/7)).show
method.peaksData
with duplicated spectra
(e.g. due to sps[c(1, 1, 1)]
).mz
, intensity
,
peaksData
methods that caused these methods to return
spectra values in wrong order given a reordered
MsBackendTimsTof
object.spectraVariables
and spectraData
methods.MsBackendTimsTof
function.mz
, intensity
, peaksData
methods to access m/z, intensities, peak matrices of spectra in the
backend.rtime
method to access retention time of spectra in the
backend.MsBackendTimsTof
class definition.backendInitialize
method to initialize a
MsBackendTimsTof
backend.[
method to subset the backend object.length
method to get object length (number of spectra
in the backend)dataStorage
method to get the TimsTOF ’*.d’ folders
where each spectra is retrieved from.